Introduction to protein classification at the EBI
Lecture notes[]
Describing and classifying proteins All beta sheet, all alpha helix, mixed alpha-beta
1MBN Myoglobin
1C3W Bacteriorhodopsin
1GFL Green fluorescent protein, almost all beta sheet
2BNH Porcine ribonuclease inhibitor (mixed alpha beta) (UniProt)
DOMAINS
- DNA pol I and Klenow fragment
MOTIFS
- Leucine-rich repeat
- Zinc finger
- Polyhistidine tag
- Kringle
- Helix-turn-helix
- Beta barrel
- Catalytic triad of serine proteases